STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbx1Developing brain homeobox 1. (335 aa)    
Predicted Functional Partners:
Lmo3
LIM domain only 3.
    
 
 0.740
Lhx2
LIM homeobox 2.
    
 
 0.633
Lhx9
LIM homeobox 9.
    
 
 0.628
Lhx6
LIM homeobox 6.
    
 
 0.571
Lhx8
LIM homeobox 8.
    
 
 0.534
Irx3
Iroquois homeobox 3.
    
 
 0.526
Tbr1
T-box brain gene 1.
    
 
 0.522
Tal2
T cell acute lymphocytic leukemia 2.
      
 0.489
Fancm
FA complementation group M.
     
 0.485
Otp
Orthopedia homeobox.
   
 
0.476
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.