STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc88bCoiled-coil domain containing 88B. (1471 aa)    
Predicted Functional Partners:
Dctn2
Dynactin subunit 2.
    
 0.899
Met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.877
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
    
 0.877
Prkg1
Protein kinase cGMP-dependent 1.
     
 0.821
Prkg2
Protein kinase cGMP-dependent 2.
     
 0.821
Cnbd2
Cyclic nucleotide binding domain containing 2.
     
 0.813
Pnpla6
Patatin like phospholipase domain containing 6.
     
 0.813
ENSMOCP00000011866
annotation not available
     
 0.813
Prkar2a
Protein kinase cAMP-dependent type II regulatory subunit alpha.
     
 0.813
ENSMOCP00000012790
annotation not available
     
 0.813
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.