STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gtf3aGeneral transcription factor IIIA. (359 aa)    
Predicted Functional Partners:
ENSMOCP00000017090
annotation not available
    
 0.871
ENSMOCP00000001039
annotation not available
    
 0.858
Ak9
Adenylate kinase 9.
    
  0.858
Gtf3c3
General transcription factor IIIC subunit 3.
    
 0.801
Polr3c
RNA polymerase III subunit C.
    
 0.792
Brf1
BRF1 RNA polymerase III transcription initiation factor subunit.
   
 
 0.790
Tbp
TATA-box binding protein.
   
 0.775
Gtf3c5
General transcription factor IIIC subunit 5.
    
 0.763
Tbpl2
TATA-box binding protein like 2.
   
 0.742
Polr2l
RNA polymerase II subunit L.
    
 0.737
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.