STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nup50Nucleoporin 50. (458 aa)    
Predicted Functional Partners:
Nup153
Nucleoporin 153.
    
 0.995
Nup43
Nucleoporin 43.
   
 0.994
Nup98
Nucleoporin 98.
   
 0.993
Nup35
Nucleoporin 35.
   
 0.992
Nup85
Nucleoporin 85.
   
 0.992
Nup214
Nucleoporin 214.
   
 
 0.991
Nup93
Nucleoporin 93.
   
 
 0.990
Nup155
Nucleoporin 155.
   
 
 0.990
Rae1
Ribonucleic acid export 1.
   
 0.988
Ranbp2
E3 SUMO-protein ligase RanBP2.
   
 0.986
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.