STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc12Coiled-coil domain containing 12. (166 aa)    
Predicted Functional Partners:
Cdc40
Cell division cycle 40.
    
  0.999
Syf2
SYF2 pre-mRNA splicing factor.
    
  0.990
Ppil1
Peptidylprolyl isomerase like 1.
   
 0.987
Ppil2
Peptidylprolyl isomerase like 2.
    
 0.982
Ppwd1
Peptidylprolyl isomerase domain and WD repeat containing 1.
     
 0.977
Alyref
Aly/REF export factor.
   
 
  0.977
Wdr25
WD repeat domain 25.
    
  0.972
Prpf19
pre-mRNA processing factor 19.
    
   0.965
Gpatch1
G-patch domain containing 1.
    
 0.959
Cdc5l
Cell division cycle 5 like.
    
   0.956
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.