STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc167Coiled-coil domain containing 167. (104 aa)    
Predicted Functional Partners:
Arfgef3
ARFGEF family member 3.
      
 0.554
Lrrtm4
Leucine rich repeat transmembrane neuronal 4.
      
 0.549
Chmp7
Charged multivesicular body protein 7.
      
 0.540
Prkcsh
Protein kinase C substrate 80K-H.
      
 0.535
Pkia
cAMP-dependent protein kinase inhibitor alpha.
      
 0.438
Sun2
Sad1 and UNC84 domain containing 2.
      
 0.429
Rrm1
Ribonucleotide reductase catalytic subunit M1.
      
 0.418
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.