Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Hes2 | Neurod2 | ENSMOCP00000025359 | ENSMOCP00000005312 | Hes family bHLH transcription factor 2. | Neuronal differentiation 2. | 0.590 |
Hes2 | Neurod6 | ENSMOCP00000025359 | ENSMOCP00000011919 | Hes family bHLH transcription factor 2. | Neuronal differentiation 6. | 0.590 |
Insm1 | Neurod2 | ENSMOCP00000010205 | ENSMOCP00000005312 | INSM transcriptional repressor 1. | Neuronal differentiation 2. | 0.647 |
Insm1 | Neurod6 | ENSMOCP00000010205 | ENSMOCP00000011919 | INSM transcriptional repressor 1. | Neuronal differentiation 6. | 0.705 |
Insm1 | Pax6 | ENSMOCP00000010205 | ENSMOCP00000019720 | INSM transcriptional repressor 1. | Paired box 6. | 0.430 |
Insm2 | Neurod2 | ENSMOCP00000008479 | ENSMOCP00000005312 | INSM transcriptional repressor 2. | Neuronal differentiation 2. | 0.647 |
Insm2 | Neurod6 | ENSMOCP00000008479 | ENSMOCP00000011919 | INSM transcriptional repressor 2. | Neuronal differentiation 6. | 0.705 |
Insm2 | Pax6 | ENSMOCP00000008479 | ENSMOCP00000019720 | INSM transcriptional repressor 2. | Paired box 6. | 0.425 |
Kcnj3 | Neurod2 | ENSMOCP00000024635 | ENSMOCP00000005312 | Potassium inwardly rectifying channel subfamily J member 3. | Neuronal differentiation 2. | 0.756 |
Neurod2 | Hes2 | ENSMOCP00000005312 | ENSMOCP00000025359 | Neuronal differentiation 2. | Hes family bHLH transcription factor 2. | 0.590 |
Neurod2 | Insm1 | ENSMOCP00000005312 | ENSMOCP00000010205 | Neuronal differentiation 2. | INSM transcriptional repressor 1. | 0.647 |
Neurod2 | Insm2 | ENSMOCP00000005312 | ENSMOCP00000008479 | Neuronal differentiation 2. | INSM transcriptional repressor 2. | 0.647 |
Neurod2 | Kcnj3 | ENSMOCP00000005312 | ENSMOCP00000024635 | Neuronal differentiation 2. | Potassium inwardly rectifying channel subfamily J member 3. | 0.756 |
Neurod2 | Neurod6 | ENSMOCP00000005312 | ENSMOCP00000011919 | Neuronal differentiation 2. | Neuronal differentiation 6. | 0.811 |
Neurod2 | Pax6 | ENSMOCP00000005312 | ENSMOCP00000019720 | Neuronal differentiation 2. | Paired box 6. | 0.584 |
Neurod2 | Prrg3 | ENSMOCP00000005312 | ENSMOCP00000008865 | Neuronal differentiation 2. | Proline rich and Gla domain 3. | 0.588 |
Neurod2 | Tcf12 | ENSMOCP00000005312 | ENSMOCP00000026316 | Neuronal differentiation 2. | Transcription factor 12. | 0.601 |
Neurod2 | Tcf3 | ENSMOCP00000005312 | ENSMOCP00000014943 | Neuronal differentiation 2. | Transcription factor 3. | 0.624 |
Neurod2 | Tcf4 | ENSMOCP00000005312 | ENSMOCP00000018094 | Neuronal differentiation 2. | Transcription factor 4. | 0.601 |
Neurod6 | Hes2 | ENSMOCP00000011919 | ENSMOCP00000025359 | Neuronal differentiation 6. | Hes family bHLH transcription factor 2. | 0.590 |
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