STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000005321annotation not available (179 aa)    
Predicted Functional Partners:
Syvn1
Synoviolin 1.
   
 
 0.888
Amfr
Autocrine motility factor receptor.
   
 
 0.879
Atf4
Activating transcription factor 4.
   
 
 0.742
Atf5
Activating transcription factor 5.
     
 0.591
Sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.545
Manf
Mesencephalic astrocyte derived neurotrophic factor.
      
 0.538
Rnf145
Ring finger protein 145.
    
 
 0.523
Dnajb9
DnaJ heat shock protein family (Hsp40) member B9.
   
  
 0.515
Rnf139
Ring finger protein 139.
    
 
 0.502
Chfr
Checkpoint with forkhead and ring finger domains.
    
 
 0.502
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.