STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc9a8Solute carrier family 9 member A8. (576 aa)    
Predicted Functional Partners:
Slc8b1
Solute carrier family 8 (sodium/lithium/calcium exchanger), member B1.
   
 
 0.613
Atp1a4
Sodium/potassium-transporting ATPase subunit alpha-4.
   
 
 0.559
Tmem254
Transmembrane protein 254.
     
 0.556
Ttc37
Tetratricopeptide repeat domain 37.
      
 0.539
Tmco3
Transmembrane and coiled-coil domains 3.
   
 
 0.525
Aldh18a1
Aldehyde dehydrogenase 18 family member A1.
     
 0.524
Prkacb
Protein kinase cAMP-activated catalytic subunit beta.
     
 0.521
Prkx
Protein kinase X-linked.
     
 0.521
Prkaca
Protein kinase cAMP-activated catalytic subunit alpha.
     
 0.521
Cd44
CD44 molecule (Indian blood group).
     
 0.506
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.