STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ank1Ankyrin 1. (1905 aa)    
Predicted Functional Partners:
Sptb
Spectrin beta, erythrocytic.
   
 0.990
Slc4a1
Solute carrier family 4 member 1 (Diego blood group).
   
 0.977
Epb42
Erythrocyte membrane protein band 4.2.
   
 0.955
Rhag
Rh associated glycoprotein.
   
 
 0.949
Itpr3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.916
Sptbn4
Spectrin beta, non-erythrocytic 4.
   
 0.913
Nfasc
Neurofascin.
    
 0.904
Cd44
CD44 molecule (Indian blood group).
     
 0.903
Itpr1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.900
Tiam1
T cell lymphoma invasion and metastasis 1.
    
 0.891
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.