STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prap1Proline-rich acidic protein 1. (152 aa)    
Predicted Functional Partners:
Cd48
CD48 molecule.
    
   0.674
Rpp40
Ribonuclease P/MRP subunit p40.
      
 0.556
Tmem184b
Transmembrane protein 184B.
      
 0.554
Slamf8
SLAM family member 8.
    
   0.476
Slamf9
SLAM family member 9.
  
 
   0.454
Lzts3
Leucine zipper tumor suppressor family member 3.
      
 0.442
Hdc
Histidine decarboxylase.
      
 0.434
Pram1
PML-RARA regulated adaptor molecule 1.
  
     0.427
Marf1
Meiosis regulator and mRNA stability factor 1.
  
 
   0.424
ENSMOCP00000002350
annotation not available
      
 0.424
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.