STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubl5Ubiquitin like 5. (73 aa)    
Predicted Functional Partners:
Sart1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.922
Mfap1
Microfibril associated protein 1.
    
 0.922
Prpf38a
pre-mRNA processing factor 38A.
    
 0.913
Txnl4a
Thioredoxin like 4A.
   
  0.882
Zmat2
Zinc finger matrin-type 2.
    
 0.874
Prpf8
pre-mRNA processing factor 8.
    
 
 0.871
Wbp11
WW domain binding protein 11.
    
  0.866
Cdc40
Cell division cycle 40.
    
 0.864
Txnl4b
Thioredoxin like 4B.
   
  0.843
Smu1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.829
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.