STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
March7Membrane associated ring-CH-type finger 7. (689 aa)    
Predicted Functional Partners:
Cnot2
CCR4-NOT transcription complex subunit 2.
    
 
 0.730
Usp7
Ubiquitin specific peptidase 7.
    
 
 0.575
Spata5
Spermatogenesis associated 5.
    
 
 0.567
Vcp
Valosin containing protein.
    
 
 0.567
ENSMOCP00000021577
annotation not available
    
 
 0.567
Ubxn8
UBX domain protein 8.
    
 
 0.559
Faf2
Fas associated factor family member 2.
    
 
 0.559
Faf1
Fas associated factor 1.
    
 
 0.559
Ube2k
Ubiquitin conjugating enzyme E2 K.
    
 0.554
Ubr2
Ubiquitin protein ligase E3 component n-recognin 2.
   
 
 0.550
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.