STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tspan1Tetraspanin 1. (241 aa)    
Predicted Functional Partners:
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
   
  0.751
Met
MET proto-oncogene, receptor tyrosine kinase.
   
  0.742
Cd19
CD19 antigen.
   
 0.711
Pdgfb
Platelet derived growth factor subunit B.
   
 0.572
Ifngr1
Interferon gamma receptor 1.
    
  0.521
Cd9
CD9 molecule.
   
 
0.494
Ins
Insulin.
   
 
 0.492
Cyb5r4
Cytochrome b5 reductase 4.
    
  0.481
Il5ra
Interleukin 5 receptor subunit alpha.
   
 
  0.481
Il13ra1
Interleukin 13 receptor subunit alpha 1.
   
 
  0.480
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.