STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clp1Cleavage and polyadenylation factor I subunit 1. (425 aa)    
Predicted Functional Partners:
Pcf11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.999
Cstf3
Cleavage stimulation factor subunit 3.
    
 0.983
Cstf2
Cleavage stimulation factor subunit 2.
   
 0.978
Cstf2t
Cleavage stimulation factor subunit 2 tau variant.
   
 0.978
Cpsf3
Cleavage and polyadenylation specific factor 3.
   
 0.963
ENSMOCP00000004937
annotation not available
    
 0.962
Fip1l1
Factor interacting with PAPOLA and CPSF1.
    
 0.962
Gtf3c3
General transcription factor IIIC subunit 3.
    
 
 0.960
Tsen2
tRNA splicing endonuclease subunit 2.
    
 0.954
Cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.952
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.