STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsbn1Round spermatid basic protein 1. (795 aa)    
Predicted Functional Partners:
Phtf1
Putative homeodomain transcription factor 1.
 
    
 0.594
Bcas2
BCAS2 pre-mRNA processing factor.
      
 0.552
Rad23a
RAD23 homolog A, nucleotide excision repair protein.
      
 0.504
Rsbn1l
Round spermatid basic protein 1 like.
  
 
  
0.495
Ap4b1
Adaptor related protein complex 4 subunit beta 1.
 
    
 0.465
Dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
      
 0.447
Ddx51
DEAD-box helicase 51.
    
   0.440
LOC102000576
ATP-dependent RNA helicase DDX51-like.
    
   0.440
Spag4
Sperm associated antigen 4.
      
 0.439
Olfml3
Olfactomedin like 3.
      
 0.432
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.