STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DxoDecapping exoribonuclease. (397 aa)    
Predicted Functional Partners:
Xrn2
5'-3' exoribonuclease 2.
   
 
 0.991
Exosc7
Exosome component 7.
   
   0.956
Rprd1a
Regulation of nuclear pre-mRNA domain containing 1A.
    
 
 0.947
Fbf1
Fas binding factor 1.
    
 
 0.947
Rprd1b
Regulation of nuclear pre-mRNA domain containing 1B.
    
 
 0.947
Rprd2
Regulation of nuclear pre-mRNA domain containing 2.
    
 
 0.850
Ccdc66
Coiled-coil domain containing 66.
    
 
 0.850
Nol9
Nucleolar protein 9.
   
 
 0.722
Xrn1
5'-3' exoribonuclease 1.
    
 
 0.716
Recql5
RecQ like helicase 5.
    
   0.712
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.