STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SardhSarcosine dehydrogenase. (919 aa)    
Predicted Functional Partners:
Gcsh
Glycine cleavage system protein H.
  
 0.994
Gldc
Glycine decarboxylase.
  
 0.987
Shmt1
Serine hydroxymethyltransferase 1.
  
 0.973
Pipox
Pipecolic acid and sarcosine oxidase.
  
 0.970
Gart
annotation not available
  
 
 0.967
Shmt2
Serine hydroxymethyltransferase 2.
  
 0.965
Dao
D-amino acid oxidase.
  
 0.958
Ddo
D-aspartate oxidase.
  
 0.928
ENSMOCP00000005238
annotation not available
   
 
 0.927
Agxt
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.921
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.