STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tdrd6Tudor domain containing 6. (2129 aa)    
Predicted Functional Partners:
Piwil2
Piwi like RNA-mediated gene silencing 2.
   
 0.967
Piwil1
Piwi like RNA-mediated gene silencing 1.
   
 0.965
Piwil4
Piwi like RNA-mediated gene silencing 4.
   
 0.941
Ddx4
DEAD-box helicase 4.
  
 0.786
Asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
  
 0.747
Tdrd9
Tudor domain containing 9.
  
0.737
Tdrkh
Tudor and KH domain containing.
   
0.733
ENSMOCP00000014633
annotation not available
   
 0.733
Aprt
Adenine phosphoribosyltransferase.
    
 0.724
Nt5e
5'-nucleotidase ecto.
  
 
 0.719
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.