STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxd10Homeobox D10. (340 aa)    
Predicted Functional Partners:
Hoxd9
Homeobox D9.
   
  
0.850
Hoxb7
Homeobox B7.
   
 
0.812
Hoxa10
Homeobox A10.
   
 
0.687
Hoxd13
Homeobox D13.
   
  
0.599
Mkx
Mohawk homeobox.
    
 
 0.587
Col2a1
Collagen type II alpha 1 chain.
      
 0.577
Hoxd4
Homeobox D4.
   
 
0.576
Hoxa11
Homeobox A11.
   
  
0.574
Hoxc11
Homeobox C11.
   
  
0.574
Hoxd11
Homeobox D11.
   
  
0.574
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.