Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atm | Efcab5 | ENSMOCP00000024432 | ENSMOCP00000006464 | Ataxia telangiectasia mutated. | EF-hand calcium binding domain 5. | 0.511 |
Atm | Mysm1 | ENSMOCP00000024432 | ENSMOCP00000001702 | Ataxia telangiectasia mutated. | Myb like, SWIRM and MPN domains 1. | 0.677 |
Atm | Setdb1 | ENSMOCP00000024432 | ENSMOCP00000019426 | Ataxia telangiectasia mutated. | SET domain bifurcated histone lysine methyltransferase 1. | 0.578 |
Atm | Setdb2 | ENSMOCP00000024432 | ENSMOCP00000026063 | Ataxia telangiectasia mutated. | Histone-lysine N-methyltransferase SETDB2. | 0.584 |
Atm | Trrap | ENSMOCP00000024432 | ENSMOCP00000000395 | Ataxia telangiectasia mutated. | Transformation/transcription domain associated protein. | 0.591 |
C1qc | Efcab5 | ENSMOCP00000008270 | ENSMOCP00000006464 | Complement C1q C chain. | EF-hand calcium binding domain 5. | 0.656 |
Efcab5 | Atm | ENSMOCP00000006464 | ENSMOCP00000024432 | EF-hand calcium binding domain 5. | Ataxia telangiectasia mutated. | 0.511 |
Efcab5 | C1qc | ENSMOCP00000006464 | ENSMOCP00000008270 | EF-hand calcium binding domain 5. | Complement C1q C chain. | 0.656 |
Efcab5 | Mysm1 | ENSMOCP00000006464 | ENSMOCP00000001702 | EF-hand calcium binding domain 5. | Myb like, SWIRM and MPN domains 1. | 0.515 |
Efcab5 | Setdb1 | ENSMOCP00000006464 | ENSMOCP00000019426 | EF-hand calcium binding domain 5. | SET domain bifurcated histone lysine methyltransferase 1. | 0.587 |
Efcab5 | Setdb2 | ENSMOCP00000006464 | ENSMOCP00000026063 | EF-hand calcium binding domain 5. | Histone-lysine N-methyltransferase SETDB2. | 0.587 |
Efcab5 | Taf12 | ENSMOCP00000006464 | ENSMOCP00000006660 | EF-hand calcium binding domain 5. | TATA-box binding protein associated factor 12. | 0.509 |
Efcab5 | Tep1 | ENSMOCP00000006464 | ENSMOCP00000016264 | EF-hand calcium binding domain 5. | Telomerase associated protein 1. | 0.691 |
Efcab5 | Tnfaip6 | ENSMOCP00000006464 | ENSMOCP00000004631 | EF-hand calcium binding domain 5. | TNF alpha induced protein 6. | 0.556 |
Efcab5 | Trrap | ENSMOCP00000006464 | ENSMOCP00000000395 | EF-hand calcium binding domain 5. | Transformation/transcription domain associated protein. | 0.507 |
Efcab5 | Ttc41 | ENSMOCP00000006464 | ENSMOCP00000012763 | EF-hand calcium binding domain 5. | Tetratricopeptide repeat protein 41-like. | 0.691 |
Mysm1 | Atm | ENSMOCP00000001702 | ENSMOCP00000024432 | Myb like, SWIRM and MPN domains 1. | Ataxia telangiectasia mutated. | 0.677 |
Mysm1 | Efcab5 | ENSMOCP00000001702 | ENSMOCP00000006464 | Myb like, SWIRM and MPN domains 1. | EF-hand calcium binding domain 5. | 0.515 |
Mysm1 | Setdb1 | ENSMOCP00000001702 | ENSMOCP00000019426 | Myb like, SWIRM and MPN domains 1. | SET domain bifurcated histone lysine methyltransferase 1. | 0.414 |
Mysm1 | Setdb2 | ENSMOCP00000001702 | ENSMOCP00000026063 | Myb like, SWIRM and MPN domains 1. | Histone-lysine N-methyltransferase SETDB2. | 0.426 |
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