STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000006570annotation not available (222 aa)    
Predicted Functional Partners:
Mlh1
mutL homolog 1.
    
 0.993
Msh2
mutS homolog 2.
  
 0.974
Msh4
mutS homolog 4.
  
 0.974
Msh6
mutS homolog 6.
  
 0.974
Msh3
mutS homolog 3.
  
 0.974
Msh5
mutS homolog 5.
  
 0.974
Vta1
Vesicle trafficking 1.
    
   0.919
ENSMOCP00000004956
annotation not available
   
 0.910
Pcna
Proliferating cell nuclear antigen.
   
 0.893
Fan1
FANCD2 and FANCI associated nuclease 1.
   
 0.880
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.