STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr41WD repeat domain 41. (460 aa)    
Predicted Functional Partners:
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.996
Smcr8
SMCR8-C9orf72 complex subunit.
    
 0.994
Cdc20
Cell division cycle 20.
   
 0.954
Fzr1
Fizzy and cell division cycle 20 related 1.
   
 0.954
ENSMOCP00000025719
annotation not available
   
 0.954
Cdc6
Cell division cycle 6.
   
 0.950
Intu
Inturned planar cell polarity protein.
   
 0.947
Anapc10
Anaphase promoting complex subunit 10.
   
 0.929
Cdk6
Cyclin dependent kinase 6.
   
 0.916
Cdk2
Cyclin dependent kinase 2.
   
 0.916
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.