STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clec9aC-type lectin domain containing 9A. (241 aa)    
Predicted Functional Partners:
Syk
Spleen associated tyrosine kinase.
    
 0.803
Clec4d
C-type lectin domain family 4 member D.
   
 
 0.774
Cd4
CD4 molecule.
   
 0.700
Thbd
Thrombomodulin.
    
 0.664
Pdpn
Podoplanin.
    
 0.664
Tnr
Tenascin R.
    
  0.655
Tnc
Tenascin C.
    
  0.655
Tnxb
Tenascin XB.
    
  0.655
Tnn
Tenascin N.
    
  0.655
ENSMOCP00000003382
annotation not available
    
 0.608
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.