STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec62SEC62 homolog, preprotein translocation factor. (398 aa)    
Predicted Functional Partners:
Sec63
SEC63 homolog, protein translocation regulator.
   
 0.999
ENSMOCP00000025960
annotation not available
    
 
 0.971
Sec61a2
SEC61 translocon alpha 2 subunit.
   
 
 0.958
Sec61a1
SEC61 translocon alpha 1 subunit.
   
 
 0.958
Stk39
Serine/threonine kinase 39.
    
 
 0.956
Oxsr1
Oxidative stress responsive kinase 1.
    
 
 0.956
ENSMOCP00000004758
annotation not available
    
 
 0.932
ENSMOCP00000005150
annotation not available
    
 
 0.932
ENSMOCP00000006590
annotation not available
    
 
 0.932
Strada
STE20 related adaptor alpha.
    
 
 0.932
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.