Lrba protein (Microtus ochrogaster) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Lrba

LPS-responsive beige-like anchor. (2121 aa)

Predicted Functional Partners:

ENSMOCP00000013885

0.918

Dlg3

0.683

Dlg4

0.526

Dlg1

0.520

ENSMOCP00000024531

0.520

Msl1

0.511

Card11

0.474

Your Current Organism:

Microtus ochrogaster

NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Card11	ENSMOCP00000013885	ENSMOCP00000012250	ENSMOCP00000013885	Caspase recruitment domain family member 11.	annotation not available	0.474
Card11	Lrba	ENSMOCP00000012250	ENSMOCP00000006929	Caspase recruitment domain family member 11.	LPS-responsive beige-like anchor.	0.474
Dlg1	Dlg3	ENSMOCP00000001418	ENSMOCP00000017157	Discs large MAGUK scaffold protein 1.	Discs large MAGUK scaffold protein 3.	0.908
Dlg1	Dlg4	ENSMOCP00000001418	ENSMOCP00000012757	Discs large MAGUK scaffold protein 1.	Discs large MAGUK scaffold protein 4.	0.921
Dlg1	ENSMOCP00000013885	ENSMOCP00000001418	ENSMOCP00000013885	Discs large MAGUK scaffold protein 1.	annotation not available	0.520
Dlg1	Lrba	ENSMOCP00000001418	ENSMOCP00000006929	Discs large MAGUK scaffold protein 1.	LPS-responsive beige-like anchor.	0.520
Dlg3	Dlg1	ENSMOCP00000017157	ENSMOCP00000001418	Discs large MAGUK scaffold protein 3.	Discs large MAGUK scaffold protein 1.	0.908
Dlg3	Dlg4	ENSMOCP00000017157	ENSMOCP00000012757	Discs large MAGUK scaffold protein 3.	Discs large MAGUK scaffold protein 4.	0.966
Dlg3	ENSMOCP00000013885	ENSMOCP00000017157	ENSMOCP00000013885	Discs large MAGUK scaffold protein 3.	annotation not available	0.683
Dlg3	ENSMOCP00000024531	ENSMOCP00000017157	ENSMOCP00000024531	Discs large MAGUK scaffold protein 3.	annotation not available	0.908
Dlg3	Lrba	ENSMOCP00000017157	ENSMOCP00000006929	Discs large MAGUK scaffold protein 3.	LPS-responsive beige-like anchor.	0.683
Dlg4	Dlg1	ENSMOCP00000012757	ENSMOCP00000001418	Discs large MAGUK scaffold protein 4.	Discs large MAGUK scaffold protein 1.	0.921
Dlg4	Dlg3	ENSMOCP00000012757	ENSMOCP00000017157	Discs large MAGUK scaffold protein 4.	Discs large MAGUK scaffold protein 3.	0.966
Dlg4	ENSMOCP00000013885	ENSMOCP00000012757	ENSMOCP00000013885	Discs large MAGUK scaffold protein 4.	annotation not available	0.526
Dlg4	ENSMOCP00000024531	ENSMOCP00000012757	ENSMOCP00000024531	Discs large MAGUK scaffold protein 4.	annotation not available	0.921
Dlg4	Lrba	ENSMOCP00000012757	ENSMOCP00000006929	Discs large MAGUK scaffold protein 4.	LPS-responsive beige-like anchor.	0.526
ENSMOCP00000013885	Card11	ENSMOCP00000013885	ENSMOCP00000012250	annotation not available	Caspase recruitment domain family member 11.	0.474
ENSMOCP00000013885	Dlg1	ENSMOCP00000013885	ENSMOCP00000001418	annotation not available	Discs large MAGUK scaffold protein 1.	0.520
ENSMOCP00000013885	Dlg3	ENSMOCP00000013885	ENSMOCP00000017157	annotation not available	Discs large MAGUK scaffold protein 3.	0.683
ENSMOCP00000013885	Dlg4	ENSMOCP00000013885	ENSMOCP00000012757	annotation not available	Discs large MAGUK scaffold protein 4.	0.526