STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srrm4Serine/arginine repetitive matrix 4. (598 aa)    
Predicted Functional Partners:
Myo6
Myosin VI.
    
 
 0.700
Espl1
Extra spindle pole bodies like 1, separase.
    
 0.661
Ppp2r2b
Protein phosphatase 2 regulatory subunit Bbeta.
    
 0.643
Ppp2r2a
Protein phosphatase 2 regulatory subunit Balpha.
    
 0.643
Mdh2
Malate dehydrogenase 2.
     
 0.633
Mex3b
Mex-3 RNA binding family member B.
    
 0.619
Egfr
Epidermal growth factor receptor.
    
 0.616
Erbb4
Erb-b2 receptor tyrosine kinase 4.
    
 0.616
Erbb3
Erb-b2 receptor tyrosine kinase 3.
    
 0.616
Erbb2
Erb-b2 receptor tyrosine kinase 2.
    
 0.616
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.