STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ferd3lFer3 like bHLH transcription factor. (168 aa)    
Predicted Functional Partners:
Tcf4
Transcription factor 4.
    
 0.771
Tcf12
Transcription factor 12.
    
 0.771
Tcf3
Transcription factor 3.
    
 0.746
Ldb2
LIM domain binding 2.
    
 0.678
ENSMOCP00000004769
annotation not available
    
 0.678
Ldb1
LIM domain binding 1.
    
 0.678
Runx2
RUNX family transcription factor 2.
    
 0.545
Runx1
Runt related transcription factor 1.
    
 0.545
Runx3
RUNX family transcription factor 3.
    
 0.545
Alx3
ALX homeobox 3.
   
 0.530
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.