STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scgb1c1Secretoglobin family 1C member 1. (95 aa)    
Predicted Functional Partners:
Mst1
Macrophage stimulating 1.
      
 0.557
Ptpn20
Protein tyrosine phosphatase non-receptor type 20.
      
 0.441
Gnaz
G protein subunit alpha z.
      
 0.440
H2bc18
Histone H2B type 2-F.
      
 0.439
Cacna1a
Calcium channel, voltage-dependent, P/Q type, alpha 1A subunit.
      
 0.437
Cacna1b
Calcium voltage-gated channel subunit alpha1 B.
      
 0.437
Kank2
KN motif and ankyrin repeat domains 2.
      
 0.436
Gnao1
G protein subunit alpha o1.
      
 0.430
ENSMOCP00000020862
annotation not available
      
 0.418
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.