STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clec1bC-type lectin domain family 1 member B. (229 aa)    
Predicted Functional Partners:
Pdpn
Podoplanin.
    
 0.989
Syk
Spleen associated tyrosine kinase.
   
 0.933
ENSMOCP00000003382
annotation not available
    
 0.765
Prdm2
PR/SET domain 2.
    
 0.765
Lsp1
Lymphocyte specific protein 1.
    
  0.730
Zap70
Tyrosine-protein kinase ZAP-70.
   
 0.728
Lcp2
Lymphocyte cytosolic protein 2.
   
 0.720
Plcg2
Phospholipase C gamma 2.
     
 0.705
Clec4d
C-type lectin domain family 4 member D.
   
 
 0.695
Ptpn11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.689
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.