STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4930550L24RikPutative MAGE domain-containing protein MAGEA13P. (313 aa)    
Predicted Functional Partners:
Nsmce4a
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.946
Nsmce1
NSE1 homolog, SMC5-SMC6 complex component.
   
 0.939
Smc5
Structural maintenance of chromosomes 5.
   
 0.937
Smc6
Structural maintenance of chromosomes 6.
   
 0.936
Nsmce2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.933
Smc3
Structural maintenance of chromosomes 3.
    
 0.764
Smc1b
Structural maintenance of chromosomes 1B.
   
 0.725
Smc1a
Structural maintenance of chromosomes 1A.
   
 0.725
Smc4
Structural maintenance of chromosomes 4.
    
 0.722
Smc2
Structural maintenance of chromosomes 2.
    
 0.715
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.