STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CebpeCCAAT enhancer binding protein epsilon. (281 aa)    
Predicted Functional Partners:
Runx1
Runt related transcription factor 1.
    
 0.939
Cdk2
Cyclin dependent kinase 2.
    
 0.920
Cox5a
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.916
COX2
Cytochrome c oxidase subunit II.
    
 0.897
Flt3
Fms related tyrosine kinase 3.
     
 0.885
Runx2
RUNX family transcription factor 2.
    
 0.880
Runx3
RUNX family transcription factor 3.
    
 0.880
Per2
Period circadian regulator 2.
    
 0.875
Runx1t1
RUNX1 partner transcriptional co-repressor 1.
    
 0.871
Cdk4
Cyclin dependent kinase 4.
    
 0.859
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.