STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BvesBlood vessel epicardial substance. (355 aa)    
Predicted Functional Partners:
Tjp1
Tight junction protein 1.
     
 0.875
Tjp2
Tight junction protein 2.
     
 0.632
Tjp3
Tight junction protein 3.
     
 0.623
Tbccd1
TBCC domain containing 1.
      
 0.559
Icmt
Isoprenylcysteine carboxyl methyltransferase.
      
 0.556
Gfod2
Glucose-fructose oxidoreductase domain containing 2.
      
 0.551
Gins1
GINS complex subunit 1.
      
 0.547
Crtam
Cytotoxic and regulatory T cell molecule.
      
 0.547
Bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.546
Tnfrsf9
TNF receptor superfamily member 9.
      
 0.544
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.