Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cnot1 | Cnot3 | ENSMOCP00000020259 | ENSMOCP00000013457 | CCR4-NOT transcription complex subunit 1. | CCR4-NOT transcription complex subunit 3. | 0.998 |
Cnot1 | Nanos1 | ENSMOCP00000020259 | ENSMOCP00000007831 | CCR4-NOT transcription complex subunit 1. | Nanos C2HC-type zinc finger 1. | 0.960 |
Cnot1 | Pum1 | ENSMOCP00000020259 | ENSMOCP00000016614 | CCR4-NOT transcription complex subunit 1. | Pumilio RNA binding family member 1. | 0.709 |
Cnot1 | Pum2 | ENSMOCP00000020259 | ENSMOCP00000014097 | CCR4-NOT transcription complex subunit 1. | Pumilio RNA binding family member 2. | 0.737 |
Cnot3 | Cnot1 | ENSMOCP00000013457 | ENSMOCP00000020259 | CCR4-NOT transcription complex subunit 3. | CCR4-NOT transcription complex subunit 1. | 0.998 |
Cnot3 | Nanos1 | ENSMOCP00000013457 | ENSMOCP00000007831 | CCR4-NOT transcription complex subunit 3. | Nanos C2HC-type zinc finger 1. | 0.677 |
Cnot3 | Pum1 | ENSMOCP00000013457 | ENSMOCP00000016614 | CCR4-NOT transcription complex subunit 3. | Pumilio RNA binding family member 1. | 0.583 |
Cnot3 | Pum2 | ENSMOCP00000013457 | ENSMOCP00000014097 | CCR4-NOT transcription complex subunit 3. | Pumilio RNA binding family member 2. | 0.583 |
Dazl | Nanos1 | ENSMOCP00000018286 | ENSMOCP00000007831 | Deleted in azoospermia-like. | Nanos C2HC-type zinc finger 1. | 0.630 |
Dazl | Piwil1 | ENSMOCP00000018286 | ENSMOCP00000017385 | Deleted in azoospermia-like. | Piwi like RNA-mediated gene silencing 1. | 0.569 |
Dazl | Pum1 | ENSMOCP00000018286 | ENSMOCP00000016614 | Deleted in azoospermia-like. | Pumilio RNA binding family member 1. | 0.555 |
Dazl | Pum2 | ENSMOCP00000018286 | ENSMOCP00000014097 | Deleted in azoospermia-like. | Pumilio RNA binding family member 2. | 0.656 |
Edar | Nanos1 | ENSMOCP00000018587 | ENSMOCP00000007831 | Ectodysplasin A receptor. | Nanos C2HC-type zinc finger 1. | 0.824 |
Nanos1 | Cnot1 | ENSMOCP00000007831 | ENSMOCP00000020259 | Nanos C2HC-type zinc finger 1. | CCR4-NOT transcription complex subunit 1. | 0.960 |
Nanos1 | Cnot3 | ENSMOCP00000007831 | ENSMOCP00000013457 | Nanos C2HC-type zinc finger 1. | CCR4-NOT transcription complex subunit 3. | 0.677 |
Nanos1 | Dazl | ENSMOCP00000007831 | ENSMOCP00000018286 | Nanos C2HC-type zinc finger 1. | Deleted in azoospermia-like. | 0.630 |
Nanos1 | Edar | ENSMOCP00000007831 | ENSMOCP00000018587 | Nanos C2HC-type zinc finger 1. | Ectodysplasin A receptor. | 0.824 |
Nanos1 | Piwil1 | ENSMOCP00000007831 | ENSMOCP00000017385 | Nanos C2HC-type zinc finger 1. | Piwi like RNA-mediated gene silencing 1. | 0.614 |
Nanos1 | Pum1 | ENSMOCP00000007831 | ENSMOCP00000016614 | Nanos C2HC-type zinc finger 1. | Pumilio RNA binding family member 1. | 0.925 |
Nanos1 | Pum2 | ENSMOCP00000007831 | ENSMOCP00000014097 | Nanos C2HC-type zinc finger 1. | Pumilio RNA binding family member 2. | 0.953 |
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