STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neurl4Neuralized E3 ubiquitin protein ligase 4. (1563 aa)    
Predicted Functional Partners:
Herc2
E3 ubiquitin-protein ligase HERC2.
    
 
 0.893
Mapk6
Mitogen-activated protein kinase 6.
    
 
 0.795
Herc1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
    
 
 0.780
Cep290
Centrosomal protein 290.
    
 
 0.670
Ccp110
Centriolar coiled-coil protein 110.
    
 
 0.661
Ccdc22
Coiled-coil domain containing 22.
     
 0.641
Cep120
Centrosomal protein 120.
    
 
 0.637
Cep97
Centrosomal protein 97.
    
 
 0.627
Ube3a
Ubiquitin protein ligase E3A.
    
 
 0.626
Cand1
Cullin associated and neddylation dissociated 1.
     
 0.610
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.