STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plxna1Plexin A1. (1895 aa)    
Predicted Functional Partners:
Rac3
Rac family small GTPase 3.
   
 0.985
Nrp1
Neuropilin 1.
    
 0.977
Sema6d
Semaphorin 6D.
    
0.957
Rnd1
Rho family GTPase 1.
    
 0.956
Rac1
Rac family small GTPase 1.
   
 0.938
Sema3a
Semaphorin 3A.
    
 0.938
Rhod
Ras homolog family member D.
    
 0.924
Rac2
Rac family small GTPase 2.
   
 0.918
Plxna4
Plexin A4.
  
  
0.903
Sema6a
Semaphorin 6A.
    
 0.902
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.