STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vpreb3V-set pre-B cell surrogate light chain 3. (120 aa)    
Predicted Functional Partners:
Cd79b
CD79b molecule.
   
 0.953
Cd19
CD19 antigen.
   
 
 0.837
ENSMOCP00000022920
annotation not available
   
 0.820
LOC101993366
T-cell leukemia/lymphoma protein 1A.
   
 
 0.800
Ms4a1
Membrane spanning 4-domains A1.
   
 0.773
H2-Ob
HLA class II histocompatibility antigen, DO beta chain.
   
  0.772
Blk
BLK proto-oncogene, Src family tyrosine kinase.
   
 0.759
LOC101996208
Polyubiquitin.
    
  0.723
Vpreb1
V-set pre-B cell surrogate light chain 1.
   
0.723
LOC102000313
Immunoglobulin omega chain-like.
   
0.723
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.