STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rad23aRAD23 homolog A, nucleotide excision repair protein. (362 aa)    
Predicted Functional Partners:
Psmd4
Proteasome 26S subunit, non-ATPase 4.
   
 0.988
Xpc
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.987
Ngly1
N-glycanase 1.
    
 0.984
Kxd1
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.978
LOC101978981
Ubiquitin-like.
    
 0.975
Psmc5
Proteasome 26S subunit, ATPase 5.
   
 0.973
Psmd2
Proteasome 26S subunit, non-ATPase 2.
    
 0.973
Psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.971
ENSMOCP00000000250
annotation not available
   
 0.967
Asna1
Guided entry of tail-anchored proteins factor 3, ATPase.
   
 0.967
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.