STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubash3bUbiquitin associated and SH3 domain containing B. (638 aa)    
Predicted Functional Partners:
H6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.915
Egfr
Epidermal growth factor receptor.
    
 
 0.872
Gpi1
Glucose-6-phosphate isomerase.
    
 0.850
Cstf3
Cleavage stimulation factor subunit 3.
    
 0.829
Cbl
Cbl proto-oncogene.
    
 
 0.827
Miox
Myo-inositol oxygenase.
  
 
 0.814
Gusb
Glucuronidase beta.
    
  0.799
Agxt
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.793
Taldo1
Transaldolase 1.
  
 
 0.793
Uap1
UDP-N-acetylglucosamine pyrophosphorylase 1.
     
 0.786
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.