STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lypd4LY6/PLAUR domain containing 4. (246 aa)    
Predicted Functional Partners:
Slurp1
Secreted LY6/PLAUR domain containing 1.
  
   
 0.687
Dmrtc2
DMRT like family C2.
   
  
 0.666
Ccdc27
Coiled-coil domain containing 27.
  
   
 0.599
4933402N03Rik
Chromosome 8 C10orf120 homolog.
  
  
 0.584
Rnf39
Ring finger protein 39.
      
 0.551
Znrd1
Zinc ribbon domain containing 1.
      
 0.544
Troap
Trophinin associated protein.
  
 
   0.542
Gm94
Chromosome 18 C5orf46 homolog.
  
     0.522
Gpihbp1
Glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1.
  
   
 0.514
Acrv1
Acrosomal protein SP-10.
  
  
 0.509
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.