STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2-ObHLA class II histocompatibility antigen, DO beta chain. (269 aa)    
Predicted Functional Partners:
H2-Oa
HLA class II histocompatibility antigen, DO alpha chain.
   
0.994
H2-Ea-ps
H-2 class II histocompatibility antigen, E-U alpha chain.
   
0.993
Cd74
CD74 molecule.
   
 0.992
H2-DMa
Class II histocompatibility antigen, M alpha chain.
  
 0.990
LOC101994307
Class II histocompatibility antigen, M beta 1 chain.
   
0.990
LOC101993262
HLA class II histocompatibility antigen, DP alpha 1 chain.
   
0.958
LOC101982663
H-2 class II histocompatibility antigen, A-R alpha chain-like.
   
0.949
LOC101995687
H-2 class II histocompatibility antigen, A-U alpha chain-like.
   
0.949
LOC101982953
H-2 class II histocompatibility antigen, A-U alpha chain-like.
   
0.949
Cd4
CD4 molecule.
   
 0.911
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.