STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000008616annotation not available (167 aa)    
Predicted Functional Partners:
Prpf3
pre-mRNA processing factor 3.
    
 0.984
Prpf4
pre-mRNA processing factor 4.
    
 0.983
Prpf31
pre-mRNA processing factor 31.
    
 0.970
Snrpd1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.949
Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.937
LOC101993200
NHP2-like protein 1.
  
 0.931
ENSMOCP00000008303
annotation not available
  
 0.931
ENSMOCP00000020136
annotation not available
  
 0.931
Wbp4
WW domain binding protein 4.
    
 0.921
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.921
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.