STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsta3Tissue specific transplantation antigen P35B. (321 aa)    
Predicted Functional Partners:
Gmds
GDP-mannose 4,6-dehydratase.
 0.994
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.941
Fpgt
Fucose-1-phosphate guanylyltransferase.
    
 0.913
H6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.910
Fcsk
Fucose kinase.
  
 
 0.908
Rps3
Ribosomal protein S3.
   
 0.888
Gale
UDP-galactose-4-epimerase.
  
 0.880
Ugdh
UDP-glucose 6-dehydrogenase.
  
 0.876
ENSMOCP00000009360
annotation not available
   
 0.845
Rps24
Ribosomal protein S24.
   
 0.845
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.