STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101980247Histone H2A type 2-A. (130 aa)    
Predicted Functional Partners:
Mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.995
LOC101986063
Histone H2B type 1-H.
 
 0.896
ENSMOCP00000002600
annotation not available
 
 0.886
H2bc18
Histone H2B type 2-F.
 
 0.877
Kdm6b
Lysine demethylase 6B.
    
 0.859
Kdm6a
Lysine demethylase 6A.
    
 0.859
ENSMOCP00000006669
annotation not available
    
 0.828
Polr2c
RNA polymerase II subunit C.
    
 0.828
Aebp2
AE binding protein 2.
    
 0.822
Nsd2
Nuclear receptor binding SET domain protein 2.
    
  0.822
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.