STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lztr1Leucine zipper like transcription regulator 1. (840 aa)    
Predicted Functional Partners:
Tnf
Tumor necrosis factor.
    
 0.912
Tradd
TNFRSF1A associated via death domain.
    
 0.909
Lta
Lymphotoxin alpha.
    
 0.902
Cul3
Cullin 3.
    
 
 0.868
Tnfaip3
TNF alpha induced protein 3.
    
 0.843
Rnf31
Ring finger protein 31.
    
 0.843
Ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.842
Rbck1
RANBP2-type and C3HC4-type zinc finger containing 1.
    
 0.841
Sharpin
SHANK associated RH domain interactor.
    
 0.829
Traf6
TNF receptor associated factor 6.
    
 0.823
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.