STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem121Transmembrane protein 121. (318 aa)    
Predicted Functional Partners:
Mitd1
MIT, microtubule interacting and transport, domain containing 1.
      
 0.605
Pglyrp1
Peptidoglycan recognition protein 1.
      
 0.598
Akap17b
A-kinase anchor protein 17B.
      
 0.596
Mrpl30
Mitochondrial ribosomal protein L30.
      
 0.538
Ids
Iduronate 2-sulfatase.
      
 0.536
Txndc9
Thioredoxin domain containing 9.
      
 0.536
Klhdc3
Kelch domain containing 3.
      
 0.454
ENSMOCP00000016967
annotation not available
      
 0.432
Pglyrp4
Peptidoglycan recognition protein 4.
      
 0.410
Pglyrp3
Peptidoglycan recognition protein 3.
      
 0.410
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.