STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adamts13ADAM metallopeptidase with thrombospondin type 1 motif 13. (1422 aa)    
Predicted Functional Partners:
Sspo
SCO-spondin.
    
0.855
Vwf
Von Willebrand factor.
    
 0.820
F8
Coagulation factor VIII.
    
 
 0.756
Pofut2
Protein O-fucosyltransferase 2.
     
 0.698
B3glct
Beta 3-glucosyltransferase.
    
 0.689
Muc5ac
Mucin 5AC, oligomeric mucus/gel-forming.
    
 0.598
Muc5b
Mucin 5, subtype B, tracheobronchial.
    
 0.598
Muc2
Mucin 2, oligomeric mucus/gel-forming.
    
 0.598
Gp1ba
Glycoprotein Ib platelet subunit alpha.
      
 0.553
Otogl
Otogelin like.
    
 0.545
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.