STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vps11VPS11 core subunit of CORVET and HOPS complexes. (941 aa)    
Predicted Functional Partners:
Vps39
VPS39 subunit of HOPS complex.
   
 0.999
Vps18
VPS18 core subunit of CORVET and HOPS complexes.
   
0.998
Vps16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.998
Tgfbrap1
Transforming growth factor beta receptor associated protein 1.
   
 0.998
Vps41
VPS41 subunit of HOPS complex.
   
 0.998
Vps8
VPS8 subunit of CORVET complex.
    
 
 0.995
Vps33a
VPS33A core subunit of CORVET and HOPS complexes.
   
 0.994
ENSMOCP00000021945
annotation not available
   
 0.993
Ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 
 0.981
Vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 
 0.978
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.