Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Disp3 | Ptchd4 | ENSMOCP00000006610 | ENSMOCP00000009057 | Dispatched RND transporter family member 3. | Patched domain containing 4. | 0.450 |
Ficd | Ptchd4 | ENSMOCP00000016623 | ENSMOCP00000009057 | FIC domain containing. | Patched domain containing 4. | 0.426 |
Hivep1 | Ptchd4 | ENSMOCP00000022417 | ENSMOCP00000009057 | HIVEP zinc finger 1. | Patched domain containing 4. | 0.541 |
Il1rapl2 | Ptchd4 | ENSMOCP00000012276 | ENSMOCP00000009057 | Interleukin 1 receptor accessory protein like 2. | Patched domain containing 4. | 0.443 |
Npc1 | Npc2 | ENSMOCP00000014590 | ENSMOCP00000014448 | NPC intracellular cholesterol transporter 1. | NPC intracellular cholesterol transporter 2. | 0.995 |
Npc1 | Ptchd4 | ENSMOCP00000014590 | ENSMOCP00000009057 | NPC intracellular cholesterol transporter 1. | Patched domain containing 4. | 0.482 |
Npc1l1 | Npc2 | ENSMOCP00000027394 | ENSMOCP00000014448 | NPC1 like intracellular cholesterol transporter 1. | NPC intracellular cholesterol transporter 2. | 0.989 |
Npc1l1 | Ptchd4 | ENSMOCP00000027394 | ENSMOCP00000009057 | NPC1 like intracellular cholesterol transporter 1. | Patched domain containing 4. | 0.482 |
Npc2 | Npc1 | ENSMOCP00000014448 | ENSMOCP00000014590 | NPC intracellular cholesterol transporter 2. | NPC intracellular cholesterol transporter 1. | 0.995 |
Npc2 | Npc1l1 | ENSMOCP00000014448 | ENSMOCP00000027394 | NPC intracellular cholesterol transporter 2. | NPC1 like intracellular cholesterol transporter 1. | 0.989 |
Npc2 | Ptchd4 | ENSMOCP00000014448 | ENSMOCP00000009057 | NPC intracellular cholesterol transporter 2. | Patched domain containing 4. | 0.680 |
Ptchd4 | Disp3 | ENSMOCP00000009057 | ENSMOCP00000006610 | Patched domain containing 4. | Dispatched RND transporter family member 3. | 0.450 |
Ptchd4 | Ficd | ENSMOCP00000009057 | ENSMOCP00000016623 | Patched domain containing 4. | FIC domain containing. | 0.426 |
Ptchd4 | Hivep1 | ENSMOCP00000009057 | ENSMOCP00000022417 | Patched domain containing 4. | HIVEP zinc finger 1. | 0.541 |
Ptchd4 | Il1rapl2 | ENSMOCP00000009057 | ENSMOCP00000012276 | Patched domain containing 4. | Interleukin 1 receptor accessory protein like 2. | 0.443 |
Ptchd4 | Npc1 | ENSMOCP00000009057 | ENSMOCP00000014590 | Patched domain containing 4. | NPC intracellular cholesterol transporter 1. | 0.482 |
Ptchd4 | Npc1l1 | ENSMOCP00000009057 | ENSMOCP00000027394 | Patched domain containing 4. | NPC1 like intracellular cholesterol transporter 1. | 0.482 |
Ptchd4 | Npc2 | ENSMOCP00000009057 | ENSMOCP00000014448 | Patched domain containing 4. | NPC intracellular cholesterol transporter 2. | 0.680 |
Ptchd4 | Tmem178 | ENSMOCP00000009057 | ENSMOCP00000004315 | Patched domain containing 4. | Transmembrane protein 178A. | 0.459 |
Ptchd4 | Vps26b | ENSMOCP00000009057 | ENSMOCP00000015973 | Patched domain containing 4. | VPS26, retromer complex component B. | 0.415 |
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