STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pagr1PAXIP1 associated glutamate rich protein 1. (251 aa)    
Predicted Functional Partners:
Kdm6a
Lysine demethylase 6A.
    
 0.946
Paxip1
PAX interacting protein 1.
    
 0.911
Kdm6b
Lysine demethylase 6B.
    
 0.910
Mdc1
Mediator of DNA damage checkpoint 1.
    
 0.906
Ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.895
Rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.887
ENSMOCP00000000356
annotation not available
    
 0.883
Wdr5
WD repeat domain 5.
    
 0.878
ENSMOCP00000010472
annotation not available
    
 0.798
ENSMOCP00000018049
annotation not available
    
 0.798
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.